Pfam 23.0: Sequence Annotation
How can I quickly find an annotated sequence of my protein?
Try using Pfam 23.0
Click on ‘VIEW A STRUCTURE’
Enter the PDB code (if you would like to simply test this without a code, you can click on ‘example’)
Click on ‘Sequence mapping’
Click on the link under ‘UniProt ID’
This will take you to the UniProt summary page.
To get all the information about your protein of interest.
You will see the following and click on the id (see below).
This is the summary of UniProt entry ‘CLICK ID”
General or sequence annotation information and scan the references.
Why is this tool great?
1) It will save time by taking advantage of the PDB ID which you probably already have
2) UniPort searches both Swiss-Prot and TrEMBL (so you don’t have too)
You can find out more information about Uniport here.
